Genome and Transcriptome Analysis of Bacterial NGS data

The Seminar will take place on 15.10.14 in building E2.1 room 106.  To receive the “Schein” you need to give a talk of 30-40 minutes, write a summary of the topic, and also attend to all talks.

Participant Tutor Topic Timetable
Vidya Oruganti Andreas Keller Comprehensive Identification of Single Nucleotide Polymorphisms Associated with Beta-lactam Resistance within Pneumococcal Mosaic Genes 08:00-09:00
Zhao Yuan Andreas Keller  A human gut microbial gene catalogue
established by metagenomic sequencing
Maarten Hamberg Andreas Keller Prediction of bacterial microRNAs and possible targets in human cell Transcriptome 10:00-11:00
Chen Hong Andreas Keller The automatic annotation of bacterial genomes 11:00-12:00
Lunch break 12:00-13:00
Dilip A Durai Christina Backes Computational analysis of bacterial RNA-Seq data 13:00-14:00
Deepti Mittal Christina Backes Transcriptome analysis identifies Bacillus anthracis genes that respond to CO2 through an AtxA-dependent mechanism 14:00-15:00
Stefanie Geisen Christina Backes Transcriptome dynamics-based operon prediction in prokaryotes. 15:00-16:00
Sascha Herzinger Christina Backes ABySS 16:00-17:00
Jan Forster Andreas Keller  NA
Konstantina Drosinou Andreas Keller  NA